Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 MTHFR-217ENST00000641820 1569 ntBASIC16.24■□□□□ 0.19
LPCAT4Q643R3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 AC073347.1-201ENST00000421633 2643 ntBASIC16.24■□□□□ 0.19
LPCAT4Q643R3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.23■□□□□ 0.19
LPCAT4Q643R3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 AL391256.1-201ENST00000443260 1855 ntBASIC16.23■□□□□ 0.19
LPCAT4Q643R3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 CA15P1-201ENST00000481698 905 ntBASIC16.23■□□□□ 0.19
LPCAT4Q643R3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 SLC25A1P4-201ENST00000567977 778 ntBASIC16.23■□□□□ 0.19
LPCAT4Q643R3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LPCAT4Q643R3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 TNRC18P2-201ENST00000417666 2714 ntBASIC16.22■□□□□ 0.19
LPCAT4Q643R3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms