Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 RPS2P1-201ENST00000434010 821 ntBASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 AC139887.3-201ENST00000568585 713 ntBASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 AC006557.2-201ENST00000592985 1240 ntBASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 FAM215A-202ENST00000632077 792 ntBASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 AC046185.3-201ENST00000623228 1824 ntBASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 AC011676.5-201ENST00000624864 2660 ntBASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 AC008735.5-201ENST00000623544 497 ntBASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TTC39BQ5VTQ0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 HNRNPDP1-201ENST00000439535 754 ntBASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 MIR7706-201ENST00000613747 67 ntBASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.92■□□□□ 0.46
TTC39BQ5VTQ0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms