Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 SLC7A15P-201ENST00000424028 1363 ntBASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 FAM220BP-201ENST00000377689 816 ntBASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
SNAPC4Q5SXM2 AL023806.1-201ENST00000603994 1649 ntBASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 SPDYE19P-201ENST00000338590 713 ntBASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 KRT223P-202ENST00000449164 1292 ntBASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC27.64■■■□□ 2.01
SNAPC4Q5SXM2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 AC093503.3-201ENST00000624917 2352 ntBASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 ANKRD19P-201ENST00000338192 862 ntBASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 AC087499.6-201ENST00000411576 835 ntBASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 RN7SL828P-201ENST00000607615 303 ntBASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 COX11-210ENST00000639671 696 ntBASIC27.63■■■□□ 2.01
SNAPC4Q5SXM2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 PRYP6-201ENST00000514804 343 ntBASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 AP000974.1-201ENST00000623909 2387 ntBASIC27.62■■■□□ 2.01
SNAPC4Q5SXM2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 TOP3BP1-201ENST00000420768 1380 ntBASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 AC055876.2-201ENST00000531834 546 ntBASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC27.61■■■□□ 2.01
SNAPC4Q5SXM2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC27.6■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms