Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN20P56880 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDN20P56880 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN20P56880 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CLDN20P56880 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN20P56880 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN20P56880 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CLDN20P56880 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN20P56880 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN20P56880 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN20P56880 FAM197Y8-203ENST00000450145 560 ntBASIC15.8■□□□□ 0.12
CLDN20P56880 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN20P56880 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN20P56880 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN20P56880 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
CLDN20P56880 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDN20P56880 AC132938.5-201ENST00000624980 1813 ntBASIC15.8■□□□□ 0.12
CLDN20P56880 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN20P56880 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN20P56880 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CLDN20P56880 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN20P56880 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.79■□□□□ 0.12
CLDN20P56880 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN20P56880 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLDN20P56880 MRPL3P1-201ENST00000400109 1033 ntBASIC15.79■□□□□ 0.12
CLDN20P56880 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN20P56880 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN20P56880 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN20P56880 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN20P56880 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN20P56880 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN20P56880 SART3-203ENST00000546611 1184 ntBASIC15.79■□□□□ 0.12
CLDN20P56880 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN20P56880 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLDN20P56880 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
CLDN20P56880 DOC2GP-204ENST00000639052 2548 ntBASIC15.79■□□□□ 0.12
CLDN20P56880 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CLDN20P56880 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 AL355312.1-201ENST00000407115 2176 ntBASIC15.79■□□□□ 0.12
CLDN20P56880 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN20P56880 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN20P56880 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLDN20P56880 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN20P56880 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLDN20P56880 AC105020.1-201ENST00000435356 2205 ntBASIC15.78■□□□□ 0.12
CLDN20P56880 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLDN20P56880 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CLDN20P56880 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN20P56880 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.78■□□□□ 0.12
CLDN20P56880 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN20P56880 FDX1P1-201ENST00000449115 551 ntBASIC15.78■□□□□ 0.12
CLDN20P56880 SCARNA2-201ENST00000458748 420 ntBASIC15.78■□□□□ 0.12
CLDN20P56880 AC002558.1-201ENST00000488906 803 ntBASIC15.78■□□□□ 0.12
CLDN20P56880 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN20P56880 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN20P56880 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 IGHV3-52-201ENST00000519770 353 ntBASIC15.78■□□□□ 0.12
CLDN20P56880 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CLDN20P56880 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.78■□□□□ 0.12
CLDN20P56880 NKAPP1-205ENST00000585790 367 ntBASIC15.78■□□□□ 0.12
CLDN20P56880 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN20P56880 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN20P56880 AC004817.3-201ENST00000602957 2129 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms