Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDH11P55287 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDH11P55287 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDH11P55287 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDH11P55287 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CDH11P55287 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CDH11P55287 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH11P55287 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH11P55287 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDH11P55287 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH11P55287 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDH11P55287 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH11P55287 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CDH11P55287 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH11P55287 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH11P55287 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 DRAXINP1-201ENST00000437611 948 ntBASIC15.79■□□□□ 0.12
CDH11P55287 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH11P55287 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH11P55287 TOB2P1-201ENST00000469761 992 ntBASIC15.79■□□□□ 0.12
CDH11P55287 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH11P55287 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH11P55287 TPSP2-201ENST00000561760 610 ntBASIC15.79■□□□□ 0.12
CDH11P55287 AC111152.3-201ENST00000569699 673 ntBASIC15.79■□□□□ 0.12
CDH11P55287 AC090616.6-201ENST00000582640 721 ntBASIC15.79■□□□□ 0.12
CDH11P55287 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH11P55287 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH11P55287 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH11P55287 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CDH11P55287 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH11P55287 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH11P55287 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CDH11P55287 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH11P55287 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.78■□□□□ 0.12
CDH11P55287 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH11P55287 AL139327.4-201ENST00000612362 153 ntBASIC15.78■□□□□ 0.12
CDH11P55287 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDH11P55287 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDH11P55287 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH11P55287 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CDH11P55287 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH11P55287 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH11P55287 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH11P55287 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CDH11P55287 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CDH11P55287 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CDH11P55287 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CDH11P55287 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH11P55287 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CDH11P55287 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CDH11P55287 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH11P55287 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH11P55287 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms