Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGA2P52926 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HMGA2P52926 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGA2P52926 MTHFR-217ENST00000641820 1569 ntBASIC15.68■□□□□ 0.1
HMGA2P52926 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HMGA2P52926 HLA-J-202ENST00000469281 1241 ntBASIC15.68■□□□□ 0.1
HMGA2P52926 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.68■□□□□ 0.1
HMGA2P52926 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.68■□□□□ 0.1
HMGA2P52926 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.68■□□□□ 0.1
HMGA2P52926 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.68■□□□□ 0.1
HMGA2P52926 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
HMGA2P52926 AC011467.2-201ENST00000598425 242 ntBASIC15.68■□□□□ 0.1
HMGA2P52926 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 AC083849.1-201ENST00000615227 514 ntBASIC15.68■□□□□ 0.1
HMGA2P52926 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGA2P52926 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGA2P52926 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HMGA2P52926 LINC00895-201ENST00000629028 1637 ntBASIC15.68■□□□□ 0.1
HMGA2P52926 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGA2P52926 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA2P52926 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGA2P52926 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGA2P52926 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGA2P52926 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 AK4P3-201ENST00000418260 669 ntBASIC15.67■□□□□ 0.1
HMGA2P52926 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGA2P52926 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.67■□□□□ 0.1
HMGA2P52926 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGA2P52926 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGA2P52926 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.67■□□□□ 0.1
HMGA2P52926 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGA2P52926 AC006011.2-201ENST00000621313 1158 ntBASIC15.67■□□□□ 0.1
HMGA2P52926 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HMGA2P52926 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HMGA2P52926 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HMGA2P52926 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 AC092364.2-201ENST00000596710 2692 ntBASIC15.67■□□□□ 0.1
HMGA2P52926 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGA2P52926 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGA2P52926 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGA2P52926 ALOX12P2-203ENST00000570921 1945 ntBASIC15.66■□□□□ 0.1
HMGA2P52926 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HMGA2P52926 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
HMGA2P52926 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HMGA2P52926 KLF4P1-201ENST00000412782 1185 ntBASIC15.66■□□□□ 0.1
HMGA2P52926 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGA2P52926 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGA2P52926 IGHV3-41-201ENST00000613121 348 ntBASIC15.66■□□□□ 0.1
HMGA2P52926 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.66■□□□□ 0.1
HMGA2P52926 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HMGA2P52926 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
HMGA2P52926 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGA2P52926 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HMGA2P52926 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms