Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.37■□□□□ 0.69
USP11P51784 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
USP11P51784 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
USP11P51784 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
USP11P51784 AL591424.1-201ENST00000442569 1213 ntBASIC19.37■□□□□ 0.69
USP11P51784 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.37■□□□□ 0.69
USP11P51784 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.37■□□□□ 0.69
USP11P51784 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.37■□□□□ 0.69
USP11P51784 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.37■□□□□ 0.69
USP11P51784 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.37■□□□□ 0.69
USP11P51784 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
USP11P51784 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.37■□□□□ 0.69
USP11P51784 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP11P51784 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.36■□□□□ 0.69
USP11P51784 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.36■□□□□ 0.69
USP11P51784 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.36■□□□□ 0.69
USP11P51784 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
USP11P51784 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.36■□□□□ 0.69
USP11P51784 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.36■□□□□ 0.69
USP11P51784 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.36■□□□□ 0.69
USP11P51784 HCG4B-203ENST00000450128 991 ntBASIC19.36■□□□□ 0.69
USP11P51784 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.36■□□□□ 0.69
USP11P51784 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.36■□□□□ 0.69
USP11P51784 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
USP11P51784 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.36■□□□□ 0.69
USP11P51784 MIR4751-201ENST00000578027 74 ntBASIC19.36■□□□□ 0.69
USP11P51784 AC027601.4-201ENST00000611259 610 ntBASIC19.36■□□□□ 0.69
USP11P51784 FAM197Y3-203ENST00000618346 717 ntBASIC19.36■□□□□ 0.69
USP11P51784 REXO1L3P-201ENST00000622202 1288 ntBASIC19.36■□□□□ 0.69
USP11P51784 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
USP11P51784 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
USP11P51784 AP001094.4-201ENST00000579008 2176 ntBASIC19.36■□□□□ 0.69
USP11P51784 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP11P51784 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.36■□□□□ 0.69
USP11P51784 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
USP11P51784 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.35■□□□□ 0.69
USP11P51784 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.35■□□□□ 0.69
USP11P51784 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.35■□□□□ 0.69
USP11P51784 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.35■□□□□ 0.69
USP11P51784 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.35■□□□□ 0.69
USP11P51784 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
USP11P51784 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
USP11P51784 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.35■□□□□ 0.69
USP11P51784 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
USP11P51784 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
USP11P51784 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.35■□□□□ 0.69
USP11P51784 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.35■□□□□ 0.69
USP11P51784 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP11P51784 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
USP11P51784 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
USP11P51784 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.34■□□□□ 0.69
USP11P51784 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.34■□□□□ 0.69
USP11P51784 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.34■□□□□ 0.69
USP11P51784 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
USP11P51784 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.34■□□□□ 0.69
USP11P51784 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.34■□□□□ 0.69
USP11P51784 KRT18P58-201ENST00000527480 1120 ntBASIC19.34■□□□□ 0.69
USP11P51784 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.34■□□□□ 0.69
USP11P51784 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.34■□□□□ 0.69
USP11P51784 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.34■□□□□ 0.69
USP11P51784 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.34■□□□□ 0.69
USP11P51784 AL671883.3-201ENST00000603274 991 ntBASIC19.34■□□□□ 0.69
USP11P51784 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
USP11P51784 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
USP11P51784 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
USP11P51784 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP11P51784 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms