Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
GPC3P51654 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
GPC3P51654 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC3P51654 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC3P51654 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.95■□□□□ 0.62
GPC3P51654 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
GPC3P51654 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.95■□□□□ 0.62
GPC3P51654 PAWRP1-201ENST00000451083 565 ntBASIC18.95■□□□□ 0.62
GPC3P51654 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.95■□□□□ 0.62
GPC3P51654 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.95■□□□□ 0.62
GPC3P51654 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.95■□□□□ 0.62
GPC3P51654 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.95■□□□□ 0.62
GPC3P51654 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC3P51654 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC3P51654 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC3P51654 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC3P51654 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
GPC3P51654 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.95■□□□□ 0.62
GPC3P51654 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.95■□□□□ 0.62
GPC3P51654 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC3P51654 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.95■□□□□ 0.62
GPC3P51654 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GPC3P51654 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GPC3P51654 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.94■□□□□ 0.62
GPC3P51654 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
GPC3P51654 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GPC3P51654 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.94■□□□□ 0.62
GPC3P51654 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 RHOQP3-201ENST00000437982 621 ntBASIC18.94■□□□□ 0.62
GPC3P51654 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.94■□□□□ 0.62
GPC3P51654 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.94■□□□□ 0.62
GPC3P51654 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 CROCCP2-202ENST00000412962 2773 ntBASIC18.94■□□□□ 0.62
GPC3P51654 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.94■□□□□ 0.62
GPC3P51654 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.94■□□□□ 0.62
GPC3P51654 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC3P51654 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.93■□□□□ 0.62
GPC3P51654 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.93■□□□□ 0.62
GPC3P51654 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.93■□□□□ 0.62
GPC3P51654 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.93■□□□□ 0.62
GPC3P51654 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
GPC3P51654 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.93■□□□□ 0.62
GPC3P51654 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.93■□□□□ 0.62
GPC3P51654 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
GPC3P51654 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.93■□□□□ 0.62
GPC3P51654 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.93■□□□□ 0.62
GPC3P51654 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GPC3P51654 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC3P51654 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GPC3P51654 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.92■□□□□ 0.62
GPC3P51654 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
GPC3P51654 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.92■□□□□ 0.62
GPC3P51654 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
GPC3P51654 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
GPC3P51654 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.92■□□□□ 0.62
GPC3P51654 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.92■□□□□ 0.62
GPC3P51654 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
GPC3P51654 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.92■□□□□ 0.62
GPC3P51654 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.92■□□□□ 0.62
GPC3P51654 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.92■□□□□ 0.62
GPC3P51654 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.92■□□□□ 0.62
GPC3P51654 AC004877.2-201ENST00000623941 599 ntBASIC18.92■□□□□ 0.62
GPC3P51654 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 AL023806.1-201ENST00000603994 1649 ntBASIC18.92■□□□□ 0.62
GPC3P51654 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.92■□□□□ 0.62
GPC3P51654 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.92■□□□□ 0.62
GPC3P51654 AC108860.2-201ENST00000562760 2183 ntBASIC18.92■□□□□ 0.62
GPC3P51654 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC3P51654 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms