Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
BRCC3P46736 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BRCC3P46736 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.21■□□□□ 0.51
BRCC3P46736 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.21■□□□□ 0.51
BRCC3P46736 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.21■□□□□ 0.51
BRCC3P46736 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BRCC3P46736 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.21■□□□□ 0.51
BRCC3P46736 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.21■□□□□ 0.51
BRCC3P46736 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.21■□□□□ 0.51
BRCC3P46736 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.21■□□□□ 0.51
BRCC3P46736 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.21■□□□□ 0.51
BRCC3P46736 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
BRCC3P46736 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.21■□□□□ 0.51
BRCC3P46736 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.21■□□□□ 0.51
BRCC3P46736 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.21■□□□□ 0.51
BRCC3P46736 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.21■□□□□ 0.51
BRCC3P46736 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
BRCC3P46736 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 AC016396.2-201ENST00000562575 1417 ntBASIC18.21■□□□□ 0.51
BRCC3P46736 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BRCC3P46736 AL138688.1-201ENST00000624851 1594 ntBASIC18.21■□□□□ 0.51
BRCC3P46736 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRCC3P46736 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRCC3P46736 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
BRCC3P46736 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.2■□□□□ 0.5
BRCC3P46736 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRCC3P46736 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRCC3P46736 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.2■□□□□ 0.5
BRCC3P46736 CNN2P11-201ENST00000429351 262 ntBASIC18.2■□□□□ 0.5
BRCC3P46736 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.2■□□□□ 0.5
BRCC3P46736 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.2■□□□□ 0.5
BRCC3P46736 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.2■□□□□ 0.5
BRCC3P46736 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.2■□□□□ 0.5
BRCC3P46736 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.2■□□□□ 0.5
BRCC3P46736 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
BRCC3P46736 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.2■□□□□ 0.5
BRCC3P46736 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
BRCC3P46736 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
BRCC3P46736 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRCC3P46736 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BRCC3P46736 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRCC3P46736 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRCC3P46736 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRCC3P46736 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.2■□□□□ 0.5
BRCC3P46736 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.2■□□□□ 0.5
BRCC3P46736 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRCC3P46736 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.19■□□□□ 0.5
BRCC3P46736 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BRCC3P46736 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BRCC3P46736 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
BRCC3P46736 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.19■□□□□ 0.5
BRCC3P46736 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BRCC3P46736 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.19■□□□□ 0.5
BRCC3P46736 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.19■□□□□ 0.5
BRCC3P46736 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BRCC3P46736 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BRCC3P46736 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.19■□□□□ 0.5
BRCC3P46736 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.19■□□□□ 0.5
BRCC3P46736 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.19■□□□□ 0.5
BRCC3P46736 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
BRCC3P46736 FZD10-202ENST00000539839 3282 ntBASIC18.19■□□□□ 0.5
BRCC3P46736 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BRCC3P46736 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
BRCC3P46736 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.19■□□□□ 0.5
BRCC3P46736 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BRCC3P46736 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRCC3P46736 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRCC3P46736 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BRCC3P46736 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRCC3P46736 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.18■□□□□ 0.5
BRCC3P46736 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
BRCC3P46736 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms