Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.06□□□□□ -0.16
CEACAM3P40198 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.05□□□□□ -0.16
CEACAM3P40198 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 AC097637.2-201ENST00000624096 1997 ntBASIC14.05□□□□□ -0.16
CEACAM3P40198 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CEACAM3P40198 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.05□□□□□ -0.16
CEACAM3P40198 AL135999.2-201ENST00000622438 1686 ntBASIC14.05□□□□□ -0.16
CEACAM3P40198 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CEACAM3P40198 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.05□□□□□ -0.16
CEACAM3P40198 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.05□□□□□ -0.16
CEACAM3P40198 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CEACAM3P40198 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.05□□□□□ -0.16
CEACAM3P40198 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CEACAM3P40198 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CEACAM3P40198 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.05□□□□□ -0.16
CEACAM3P40198 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CEACAM3P40198 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CEACAM3P40198 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CEACAM3P40198 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.04□□□□□ -0.16
CEACAM3P40198 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CEACAM3P40198 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CEACAM3P40198 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.04□□□□□ -0.16
CEACAM3P40198 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.04□□□□□ -0.16
CEACAM3P40198 FAM197Y8-203ENST00000450145 560 ntBASIC14.04□□□□□ -0.16
CEACAM3P40198 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.04□□□□□ -0.16
CEACAM3P40198 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.04□□□□□ -0.16
CEACAM3P40198 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.04□□□□□ -0.16
CEACAM3P40198 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.04□□□□□ -0.16
CEACAM3P40198 AC006557.2-201ENST00000592985 1240 ntBASIC14.04□□□□□ -0.16
CEACAM3P40198 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.04□□□□□ -0.16
CEACAM3P40198 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CEACAM3P40198 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.04□□□□□ -0.16
CEACAM3P40198 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CEACAM3P40198 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CEACAM3P40198 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.04□□□□□ -0.16
CEACAM3P40198 AC148477.5-201ENST00000625164 1645 ntBASIC14.04□□□□□ -0.16
CEACAM3P40198 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CEACAM3P40198 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.04□□□□□ -0.16
CEACAM3P40198 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CEACAM3P40198 AC008894.3-201ENST00000624324 3103 ntBASIC14.04□□□□□ -0.16
CEACAM3P40198 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.03□□□□□ -0.16
CEACAM3P40198 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms