Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNCAP37840 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNCAP37840 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.21□□□□□ -0.14
SNCAP37840 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SNCAP37840 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNCAP37840 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.21□□□□□ -0.14
SNCAP37840 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNCAP37840 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNCAP37840 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.21□□□□□ -0.14
SNCAP37840 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SNCAP37840 TSPY26P-202ENST00000565928 3884 ntBASIC14.2□□□□□ -0.14
SNCAP37840 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SNCAP37840 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 CYP2D8P-201ENST00000433633 1490 ntBASIC14.2□□□□□ -0.14
SNCAP37840 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SNCAP37840 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 AC126755.1-201ENST00000525846 6405 ntBASIC14.2□□□□□ -0.14
SNCAP37840 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.2□□□□□ -0.14
SNCAP37840 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 ECEL1P2-202ENST00000465689 757 ntBASIC14.2□□□□□ -0.14
SNCAP37840 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 AC113404.2-201ENST00000507884 177 ntBASIC14.2□□□□□ -0.14
SNCAP37840 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 MIR4497-201ENST00000583208 89 ntBASIC14.2□□□□□ -0.14
SNCAP37840 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 AC010947.1-201ENST00000623454 693 ntBASIC14.2□□□□□ -0.14
SNCAP37840 LINC01451-201ENST00000623792 534 ntBASIC14.2□□□□□ -0.14
SNCAP37840 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SNCAP37840 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.2□□□□□ -0.14
SNCAP37840 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 LINC00167-201ENST00000530583 1419 ntBASIC14.2□□□□□ -0.14
SNCAP37840 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 AC005915.1-201ENST00000624912 2018 ntBASIC14.2□□□□□ -0.14
SNCAP37840 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SNCAP37840 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.2□□□□□ -0.14
SNCAP37840 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNCAP37840 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SNCAP37840 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.19□□□□□ -0.14
SNCAP37840 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.19□□□□□ -0.14
SNCAP37840 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SNCAP37840 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.19□□□□□ -0.14
SNCAP37840 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 AL157888.1-201ENST00000631930 593 ntBASIC14.19□□□□□ -0.14
SNCAP37840 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNCAP37840 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SNCAP37840 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms