Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPB2P35606 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPB2P35606 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPB2P35606 AL139400.1-201ENST00000366220 510 ntBASIC19.58■□□□□ 0.72
COPB2P35606 AL355306.1-201ENST00000415580 579 ntBASIC19.58■□□□□ 0.72
COPB2P35606 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.58■□□□□ 0.72
COPB2P35606 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.58■□□□□ 0.72
COPB2P35606 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COPB2P35606 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COPB2P35606 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COPB2P35606 AC005412.3-201ENST00000580309 715 ntBASIC19.58■□□□□ 0.72
COPB2P35606 MIR3197-201ENST00000582241 73 ntBASIC19.58■□□□□ 0.72
COPB2P35606 MIR4515-201ENST00000584082 81 ntBASIC19.58■□□□□ 0.72
COPB2P35606 LINC02084-201ENST00000606069 1096 ntBASIC19.58■□□□□ 0.72
COPB2P35606 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COPB2P35606 AC026120.1-201ENST00000611536 926 ntBASIC19.58■□□□□ 0.72
COPB2P35606 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.58■□□□□ 0.72
COPB2P35606 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPB2P35606 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.58■□□□□ 0.72
COPB2P35606 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COPB2P35606 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COPB2P35606 HCG11-201ENST00000411553 5696 ntBASIC19.58■□□□□ 0.72
COPB2P35606 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.57■□□□□ 0.72
COPB2P35606 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
COPB2P35606 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.57■□□□□ 0.72
COPB2P35606 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.57■□□□□ 0.72
COPB2P35606 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
COPB2P35606 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.57■□□□□ 0.72
COPB2P35606 MIR770-201ENST00000390219 98 ntBASIC19.57■□□□□ 0.72
COPB2P35606 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.57■□□□□ 0.72
COPB2P35606 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.57■□□□□ 0.72
COPB2P35606 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.57■□□□□ 0.72
COPB2P35606 RN7SL589P-201ENST00000481268 310 ntBASIC19.57■□□□□ 0.72
COPB2P35606 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.57■□□□□ 0.72
COPB2P35606 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.57■□□□□ 0.72
COPB2P35606 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.57■□□□□ 0.72
COPB2P35606 AC011467.4-201ENST00000594891 528 ntBASIC19.57■□□□□ 0.72
COPB2P35606 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.57■□□□□ 0.72
COPB2P35606 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
COPB2P35606 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
COPB2P35606 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.57■□□□□ 0.72
COPB2P35606 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPB2P35606 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COPB2P35606 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
COPB2P35606 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
COPB2P35606 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.56■□□□□ 0.72
COPB2P35606 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.56■□□□□ 0.72
COPB2P35606 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.56■□□□□ 0.72
COPB2P35606 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.56■□□□□ 0.72
COPB2P35606 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.56■□□□□ 0.72
COPB2P35606 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
COPB2P35606 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.56■□□□□ 0.72
COPB2P35606 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
COPB2P35606 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.56■□□□□ 0.72
COPB2P35606 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COPB2P35606 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.56■□□□□ 0.72
COPB2P35606 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
COPB2P35606 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
COPB2P35606 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.56■□□□□ 0.72
COPB2P35606 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPB2P35606 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms