Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
MMP11P24347 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
MMP11P24347 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MMP11P24347 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP11P24347 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.34■□□□□ 0.21
MMP11P24347 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MMP11P24347 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP11P24347 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MMP11P24347 KRT18P3-201ENST00000451602 1288 ntBASIC16.34■□□□□ 0.21
MMP11P24347 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.34■□□□□ 0.21
MMP11P24347 PGAM5P1-201ENST00000518923 814 ntBASIC16.34■□□□□ 0.21
MMP11P24347 AC092865.5-201ENST00000545435 363 ntBASIC16.34■□□□□ 0.21
MMP11P24347 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.34■□□□□ 0.21
MMP11P24347 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP11P24347 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.34■□□□□ 0.21
MMP11P24347 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MMP11P24347 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP11P24347 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
MMP11P24347 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP11P24347 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MMP11P24347 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MMP11P24347 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.33■□□□□ 0.21
MMP11P24347 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
MMP11P24347 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
MMP11P24347 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MMP11P24347 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP11P24347 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MMP11P24347 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.33■□□□□ 0.2
MMP11P24347 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
MMP11P24347 BX842568.4-201ENST00000421222 227 ntBASIC16.33■□□□□ 0.2
MMP11P24347 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.33■□□□□ 0.2
MMP11P24347 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
MMP11P24347 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.33■□□□□ 0.2
MMP11P24347 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
MMP11P24347 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.33■□□□□ 0.2
MMP11P24347 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MMP11P24347 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
MMP11P24347 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP11P24347 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP11P24347 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
MMP11P24347 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
MMP11P24347 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP11P24347 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP11P24347 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.32■□□□□ 0.2
MMP11P24347 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP11P24347 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MMP11P24347 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.32■□□□□ 0.2
MMP11P24347 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MMP11P24347 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.32■□□□□ 0.2
MMP11P24347 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.32■□□□□ 0.2
MMP11P24347 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 AC009336.1-201ENST00000608941 1553 ntBASIC16.32■□□□□ 0.2
MMP11P24347 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
MMP11P24347 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MMP11P24347 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP11P24347 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP11P24347 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms