Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.89■□□□□ 0.77
ERCC3P19447 FAM58CP-201ENST00000435741 640 ntBASIC19.89■□□□□ 0.77
ERCC3P19447 AC074386.1-202ENST00000463561 864 ntBASIC19.89■□□□□ 0.77
ERCC3P19447 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC3P19447 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.89■□□□□ 0.77
ERCC3P19447 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.89■□□□□ 0.77
ERCC3P19447 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC3P19447 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.89■□□□□ 0.77
ERCC3P19447 AP002472.1-201ENST00000577490 586 ntBASIC19.89■□□□□ 0.77
ERCC3P19447 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.89■□□□□ 0.77
ERCC3P19447 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC3P19447 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC3P19447 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC3P19447 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
ERCC3P19447 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC3P19447 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ERCC3P19447 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.88■□□□□ 0.77
ERCC3P19447 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.88■□□□□ 0.77
ERCC3P19447 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ERCC3P19447 AL590787.1-201ENST00000568856 1315 ntBASIC19.88■□□□□ 0.77
ERCC3P19447 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.88■□□□□ 0.77
ERCC3P19447 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.88■□□□□ 0.77
ERCC3P19447 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
ERCC3P19447 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.88■□□□□ 0.77
ERCC3P19447 AC023141.13-201ENST00000604991 943 ntBASIC19.88■□□□□ 0.77
ERCC3P19447 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ERCC3P19447 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.88■□□□□ 0.77
ERCC3P19447 AC007064.4-201ENST00000637740 555 ntBASIC19.88■□□□□ 0.77
ERCC3P19447 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ERCC3P19447 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ERCC3P19447 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC3P19447 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.87■□□□□ 0.77
ERCC3P19447 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ERCC3P19447 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.87■□□□□ 0.77
ERCC3P19447 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.87■□□□□ 0.77
ERCC3P19447 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.87■□□□□ 0.77
ERCC3P19447 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC3P19447 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.87■□□□□ 0.77
ERCC3P19447 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ERCC3P19447 ACTG1P4-201ENST00000425123 1122 ntBASIC19.87■□□□□ 0.77
ERCC3P19447 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC3P19447 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.87■□□□□ 0.77
ERCC3P19447 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.87■□□□□ 0.77
ERCC3P19447 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.87■□□□□ 0.77
ERCC3P19447 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.87■□□□□ 0.77
ERCC3P19447 AC027612.4-201ENST00000605371 583 ntBASIC19.87■□□□□ 0.77
ERCC3P19447 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.87■□□□□ 0.77
ERCC3P19447 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ERCC3P19447 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ERCC3P19447 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
ERCC3P19447 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.87■□□□□ 0.77
ERCC3P19447 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
ERCC3P19447 KRT18P55-202ENST00000578578 1546 ntBASIC19.86■□□□□ 0.77
ERCC3P19447 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ERCC3P19447 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC3P19447 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC3P19447 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ERCC3P19447 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC3P19447 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
ERCC3P19447 AL645939.2-201ENST00000427340 991 ntBASIC19.86■□□□□ 0.77
ERCC3P19447 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ERCC3P19447 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.86■□□□□ 0.77
ERCC3P19447 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC3P19447 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
ERCC3P19447 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC3P19447 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.86■□□□□ 0.77
ERCC3P19447 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC3P19447 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.86■□□□□ 0.77
ERCC3P19447 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ERCC3P19447 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms