Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
XRCC1P18887 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
XRCC1P18887 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
XRCC1P18887 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
XRCC1P18887 AC018712.1-201ENST00000455767 687 ntBASIC17.18■□□□□ 0.34
XRCC1P18887 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.18■□□□□ 0.34
XRCC1P18887 RNA5SP419-201ENST00000515908 135 ntBASIC17.18■□□□□ 0.34
XRCC1P18887 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.18■□□□□ 0.34
XRCC1P18887 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.18■□□□□ 0.34
XRCC1P18887 AP001005.1-201ENST00000571755 1248 ntBASIC17.18■□□□□ 0.34
XRCC1P18887 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.18■□□□□ 0.34
XRCC1P18887 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
XRCC1P18887 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.18■□□□□ 0.34
XRCC1P18887 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
XRCC1P18887 AC105020.1-201ENST00000435356 2205 ntBASIC17.18■□□□□ 0.34
XRCC1P18887 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.18■□□□□ 0.34
XRCC1P18887 AC009949.1-201ENST00000623048 1830 ntBASIC17.18■□□□□ 0.34
XRCC1P18887 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
XRCC1P18887 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
XRCC1P18887 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
XRCC1P18887 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.18■□□□□ 0.34
XRCC1P18887 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.18■□□□□ 0.34
XRCC1P18887 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
XRCC1P18887 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
XRCC1P18887 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
XRCC1P18887 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
XRCC1P18887 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.18■□□□□ 0.34
XRCC1P18887 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
XRCC1P18887 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
XRCC1P18887 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.17■□□□□ 0.34
XRCC1P18887 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
XRCC1P18887 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
XRCC1P18887 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
XRCC1P18887 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
XRCC1P18887 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 CICP6-201ENST00000457191 2729 ntBASIC17.17■□□□□ 0.34
XRCC1P18887 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
XRCC1P18887 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
XRCC1P18887 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.17■□□□□ 0.34
XRCC1P18887 AL031284.1-201ENST00000419297 478 ntBASIC17.17■□□□□ 0.34
XRCC1P18887 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.17■□□□□ 0.34
XRCC1P18887 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.17■□□□□ 0.34
XRCC1P18887 SART3-203ENST00000546611 1184 ntBASIC17.17■□□□□ 0.34
XRCC1P18887 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
XRCC1P18887 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.17■□□□□ 0.34
XRCC1P18887 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.17■□□□□ 0.34
XRCC1P18887 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.17■□□□□ 0.34
XRCC1P18887 AC148477.8-201ENST00000624298 468 ntBASIC17.17■□□□□ 0.34
XRCC1P18887 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
XRCC1P18887 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
XRCC1P18887 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 AL353593.2-201ENST00000602529 1483 ntBASIC17.17■□□□□ 0.34
XRCC1P18887 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XRCC1P18887 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.16■□□□□ 0.34
XRCC1P18887 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.16■□□□□ 0.34
XRCC1P18887 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
XRCC1P18887 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.16■□□□□ 0.34
XRCC1P18887 AL049757.1-201ENST00000616842 1596 ntBASIC17.16■□□□□ 0.34
XRCC1P18887 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 RPS2P28-201ENST00000314255 741 ntBASIC17.16■□□□□ 0.34
XRCC1P18887 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.16■□□□□ 0.34
XRCC1P18887 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.16■□□□□ 0.34
XRCC1P18887 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
XRCC1P18887 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
XRCC1P18887 AC021087.4-201ENST00000563761 564 ntBASIC17.16■□□□□ 0.34
XRCC1P18887 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.16■□□□□ 0.34
XRCC1P18887 NKAPP1-205ENST00000585790 367 ntBASIC17.16■□□□□ 0.34
XRCC1P18887 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 AC073592.4-201ENST00000623827 446 ntBASIC17.16■□□□□ 0.34
XRCC1P18887 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 AC079776.2-201ENST00000641154 1609 ntBASIC17.16■□□□□ 0.34
XRCC1P18887 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms