Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.4■□□□□ 0.7
GCFC2P16383 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.4■□□□□ 0.7
GCFC2P16383 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.4■□□□□ 0.7
GCFC2P16383 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.4■□□□□ 0.7
GCFC2P16383 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.4■□□□□ 0.7
GCFC2P16383 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.4■□□□□ 0.7
GCFC2P16383 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.4■□□□□ 0.7
GCFC2P16383 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCFC2P16383 AC011270.2-201ENST00000624293 2550 ntBASIC19.4■□□□□ 0.7
GCFC2P16383 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCFC2P16383 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.4■□□□□ 0.7
GCFC2P16383 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
GCFC2P16383 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCFC2P16383 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCFC2P16383 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GCFC2P16383 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.4■□□□□ 0.7
GCFC2P16383 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCFC2P16383 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
GCFC2P16383 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCFC2P16383 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
GCFC2P16383 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.39■□□□□ 0.7
GCFC2P16383 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GCFC2P16383 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GCFC2P16383 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GCFC2P16383 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
GCFC2P16383 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.39■□□□□ 0.69
GCFC2P16383 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GCFC2P16383 PRORSD1P-202ENST00000563365 2154 ntBASIC19.39■□□□□ 0.69
GCFC2P16383 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.39■□□□□ 0.69
GCFC2P16383 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.39■□□□□ 0.69
GCFC2P16383 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.39■□□□□ 0.69
GCFC2P16383 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GCFC2P16383 BX640515.1-201ENST00000617215 977 ntBASIC19.39■□□□□ 0.69
GCFC2P16383 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.39■□□□□ 0.69
GCFC2P16383 TNRC18P3-201ENST00000441896 2691 ntBASIC19.39■□□□□ 0.69
GCFC2P16383 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.39■□□□□ 0.69
GCFC2P16383 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.39■□□□□ 0.69
GCFC2P16383 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
GCFC2P16383 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.39■□□□□ 0.69
GCFC2P16383 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCFC2P16383 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
GCFC2P16383 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GCFC2P16383 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.38■□□□□ 0.69
GCFC2P16383 AC087163.2-201ENST00000457299 853 ntBASIC19.38■□□□□ 0.69
GCFC2P16383 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 AC108073.2-201ENST00000464002 357 ntBASIC19.38■□□□□ 0.69
GCFC2P16383 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.38■□□□□ 0.69
GCFC2P16383 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.38■□□□□ 0.69
GCFC2P16383 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.38■□□□□ 0.69
GCFC2P16383 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.38■□□□□ 0.69
GCFC2P16383 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.38■□□□□ 0.69
GCFC2P16383 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.38■□□□□ 0.69
GCFC2P16383 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
GCFC2P16383 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCFC2P16383 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.38■□□□□ 0.69
GCFC2P16383 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
GCFC2P16383 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 AC092053.1-201ENST00000605787 1936 ntBASIC19.37■□□□□ 0.69
GCFC2P16383 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.37■□□□□ 0.69
GCFC2P16383 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 IL9RP2-201ENST00000423948 1312 ntBASIC19.37■□□□□ 0.69
GCFC2P16383 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCFC2P16383 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.37■□□□□ 0.69
GCFC2P16383 AL590627.1-203ENST00000421194 1026 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms