Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FREM3P0C091 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
FREM3P0C091 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 AP002414.1-201ENST00000391405 1147 ntBASIC15.59■□□□□ 0.09
FREM3P0C091 MRPL20P1-201ENST00000400819 433 ntBASIC15.59■□□□□ 0.09
FREM3P0C091 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.59■□□□□ 0.09
FREM3P0C091 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.59■□□□□ 0.09
FREM3P0C091 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.59■□□□□ 0.09
FREM3P0C091 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.59■□□□□ 0.09
FREM3P0C091 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.59■□□□□ 0.09
FREM3P0C091 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
FREM3P0C091 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.59■□□□□ 0.09
FREM3P0C091 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 AC009053.2-201ENST00000563701 2365 ntBASIC15.59■□□□□ 0.09
FREM3P0C091 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
FREM3P0C091 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
FREM3P0C091 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.59■□□□□ 0.09
FREM3P0C091 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
FREM3P0C091 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.59■□□□□ 0.09
FREM3P0C091 AC055717.3-201ENST00000622967 595 ntBASIC15.59■□□□□ 0.09
FREM3P0C091 AC092865.6-201ENST00000642101 219 ntBASIC15.59■□□□□ 0.09
FREM3P0C091 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
FREM3P0C091 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.59■□□□□ 0.09
FREM3P0C091 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FREM3P0C091 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.58■□□□□ 0.09
FREM3P0C091 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FREM3P0C091 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FREM3P0C091 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.58■□□□□ 0.09
FREM3P0C091 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
FREM3P0C091 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.58■□□□□ 0.08
FREM3P0C091 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.58■□□□□ 0.08
FREM3P0C091 RPS15P9-201ENST00000494093 319 ntBASIC15.58■□□□□ 0.08
FREM3P0C091 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.58■□□□□ 0.08
FREM3P0C091 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.58■□□□□ 0.08
FREM3P0C091 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.58■□□□□ 0.08
FREM3P0C091 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.58■□□□□ 0.08
FREM3P0C091 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.58■□□□□ 0.08
FREM3P0C091 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.58■□□□□ 0.08
FREM3P0C091 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
FREM3P0C091 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.58■□□□□ 0.08
FREM3P0C091 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.58■□□□□ 0.08
FREM3P0C091 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.58■□□□□ 0.08
FREM3P0C091 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.58■□□□□ 0.08
FREM3P0C091 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.58■□□□□ 0.08
FREM3P0C091 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.58■□□□□ 0.08
FREM3P0C091 GGTLC5P-201ENST00000617623 998 ntBASIC15.58■□□□□ 0.08
FREM3P0C091 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.58■□□□□ 0.08
FREM3P0C091 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
FREM3P0C091 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FREM3P0C091 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
FREM3P0C091 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
FREM3P0C091 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms