Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.56□□□□□ -0.24
TRGV3P03979 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRGV3P03979 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.56□□□□□ -0.24
TRGV3P03979 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.56□□□□□ -0.24
TRGV3P03979 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
TRGV3P03979 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRGV3P03979 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.56□□□□□ -0.24
TRGV3P03979 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.56□□□□□ -0.24
TRGV3P03979 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRGV3P03979 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.56□□□□□ -0.24
TRGV3P03979 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.56□□□□□ -0.24
TRGV3P03979 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.56□□□□□ -0.24
TRGV3P03979 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.56□□□□□ -0.24
TRGV3P03979 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.56□□□□□ -0.24
TRGV3P03979 AL121912.1-201ENST00000603683 238 ntBASIC13.56□□□□□ -0.24
TRGV3P03979 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRGV3P03979 AL022326.1-202ENST00000641533 845 ntBASIC13.56□□□□□ -0.24
TRGV3P03979 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 AL023806.1-201ENST00000603994 1649 ntBASIC13.56□□□□□ -0.24
TRGV3P03979 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRGV3P03979 AC004817.3-201ENST00000602957 2129 ntBASIC13.55□□□□□ -0.24
TRGV3P03979 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.55□□□□□ -0.24
TRGV3P03979 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.55□□□□□ -0.24
TRGV3P03979 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.55□□□□□ -0.24
TRGV3P03979 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRGV3P03979 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
TRGV3P03979 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 AC097637.2-201ENST00000624096 1997 ntBASIC13.55□□□□□ -0.24
TRGV3P03979 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 AC073648.2-201ENST00000510116 352 ntBASIC13.55□□□□□ -0.24
TRGV3P03979 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 SART3-203ENST00000546611 1184 ntBASIC13.55□□□□□ -0.24
TRGV3P03979 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.55□□□□□ -0.24
TRGV3P03979 AC073592.4-201ENST00000623827 446 ntBASIC13.55□□□□□ -0.24
TRGV3P03979 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 AL135999.2-201ENST00000622438 1686 ntBASIC13.55□□□□□ -0.24
TRGV3P03979 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.55□□□□□ -0.24
TRGV3P03979 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRGV3P03979 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRGV3P03979 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRGV3P03979 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV3P03979 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV3P03979 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV3P03979 AC009053.2-201ENST00000563701 2365 ntBASIC13.54□□□□□ -0.24
TRGV3P03979 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV3P03979 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRGV3P03979 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRGV3P03979 AC141586.5-201ENST00000624546 2050 ntBASIC13.54□□□□□ -0.24
TRGV3P03979 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.54□□□□□ -0.24
TRGV3P03979 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV3P03979 PRORSD1P-202ENST00000563365 2154 ntBASIC13.54□□□□□ -0.24
TRGV3P03979 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV3P03979 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.54□□□□□ -0.24
TRGV3P03979 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TRGV3P03979 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV3P03979 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.54□□□□□ -0.24
TRGV3P03979 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV3P03979 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV3P03979 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.54□□□□□ -0.24
TRGV3P03979 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRGV3P03979 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.54□□□□□ -0.24
TRGV3P03979 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.54□□□□□ -0.24
TRGV3P03979 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV3P03979 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.54□□□□□ -0.24
TRGV3P03979 MTDHP4-201ENST00000600287 670 ntBASIC13.54□□□□□ -0.24
TRGV3P03979 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms