Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 AC046185.3-201ENST00000623228 1824 ntBASIC15.48■□□□□ 0.07
HLA-DQA2P01906 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 KRT18P21-201ENST00000515767 1272 ntBASIC15.48■□□□□ 0.07
HLA-DQA2P01906 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 KRT8P26-201ENST00000534154 1276 ntBASIC15.48■□□□□ 0.07
HLA-DQA2P01906 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 AL136038.3-201ENST00000561909 1096 ntBASIC15.48■□□□□ 0.07
HLA-DQA2P01906 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 AC125634.1-201ENST00000438758 1403 ntBASIC15.48■□□□□ 0.07
HLA-DQA2P01906 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQA2P01906 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.47■□□□□ 0.07
HLA-DQA2P01906 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 AC106886.4-201ENST00000623557 2502 ntBASIC15.47■□□□□ 0.07
HLA-DQA2P01906 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 FAM220CP-201ENST00000395253 831 ntBASIC15.47■□□□□ 0.07
HLA-DQA2P01906 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 AC103564.2-201ENST00000432853 1299 ntBASIC15.47■□□□□ 0.07
HLA-DQA2P01906 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 BX276092.5-203ENST00000456199 560 ntBASIC15.47■□□□□ 0.07
HLA-DQA2P01906 RN7SL606P-201ENST00000472779 293 ntBASIC15.47■□□□□ 0.07
HLA-DQA2P01906 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.47■□□□□ 0.07
HLA-DQA2P01906 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 AC079328.2-201ENST00000561241 3354 ntBASIC15.46■□□□□ 0.07
HLA-DQA2P01906 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms