Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DRAP01903 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DRAP01903 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.47■□□□□ 0.55
HLA-DRAP01903 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.47■□□□□ 0.55
HLA-DRAP01903 AC105339.3-201ENST00000560043 636 ntBASIC18.47■□□□□ 0.55
HLA-DRAP01903 MIR7706-201ENST00000613747 67 ntBASIC18.47■□□□□ 0.55
HLA-DRAP01903 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HLA-DRAP01903 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HLA-DRAP01903 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DRAP01903 AC022211.2-201ENST00000585075 2527 ntBASIC18.47■□□□□ 0.55
HLA-DRAP01903 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 AC092068.3-201ENST00000587894 2016 ntBASIC18.46■□□□□ 0.55
HLA-DRAP01903 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 AP002414.1-201ENST00000391405 1147 ntBASIC18.46■□□□□ 0.55
HLA-DRAP01903 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 AL805961.1-202ENST00000641562 540 ntBASIC18.46■□□□□ 0.55
HLA-DRAP01903 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DRAP01903 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRAP01903 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
HLA-DRAP01903 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 RPS2P28-201ENST00000314255 741 ntBASIC18.45■□□□□ 0.54
HLA-DRAP01903 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 AC136632.2-201ENST00000512891 861 ntBASIC18.45■□□□□ 0.54
HLA-DRAP01903 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 AC020916.1-201ENST00000587762 1774 ntBASIC18.45■□□□□ 0.54
HLA-DRAP01903 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRAP01903 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DRAP01903 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DRAP01903 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DRAP01903 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms