Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 KRT18P3-201ENST00000451602 1288 ntBASIC18.13■□□□□ 0.49
RTN3O95197 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.13■□□□□ 0.49
RTN3O95197 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.13■□□□□ 0.49
RTN3O95197 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.13■□□□□ 0.49
RTN3O95197 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RTN3O95197 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN3O95197 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN3O95197 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN3O95197 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN3O95197 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RTN3O95197 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN3O95197 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RTN3O95197 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN3O95197 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
RTN3O95197 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.12■□□□□ 0.49
RTN3O95197 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTN3O95197 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN3O95197 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RTN3O95197 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTN3O95197 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.12■□□□□ 0.49
RTN3O95197 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.12■□□□□ 0.49
RTN3O95197 PRSS29P-201ENST00000440800 595 ntBASIC18.12■□□□□ 0.49
RTN3O95197 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 RNA5SP416-201ENST00000516838 111 ntBASIC18.12■□□□□ 0.49
RTN3O95197 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.12■□□□□ 0.49
RTN3O95197 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN3O95197 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
RTN3O95197 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RTN3O95197 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTN3O95197 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTN3O95197 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTN3O95197 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN3O95197 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN3O95197 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN3O95197 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 AC134043.2-201ENST00000624206 2238 ntBASIC18.11■□□□□ 0.49
RTN3O95197 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RTN3O95197 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RTN3O95197 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RTN3O95197 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RTN3O95197 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.11■□□□□ 0.49
RTN3O95197 MRPL20P1-201ENST00000400819 433 ntBASIC18.11■□□□□ 0.49
RTN3O95197 CRYGEP-201ENST00000412192 528 ntBASIC18.11■□□□□ 0.49
RTN3O95197 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.11■□□□□ 0.49
RTN3O95197 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN3O95197 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.11■□□□□ 0.49
RTN3O95197 MIR4751-201ENST00000578027 74 ntBASIC18.11■□□□□ 0.49
RTN3O95197 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.11■□□□□ 0.49
RTN3O95197 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.11■□□□□ 0.49
RTN3O95197 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN3O95197 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTN3O95197 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.11■□□□□ 0.49
RTN3O95197 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN3O95197 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN3O95197 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.11■□□□□ 0.49
RTN3O95197 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN3O95197 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.11■□□□□ 0.49
RTN3O95197 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN3O95197 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RTN3O95197 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTN3O95197 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTN3O95197 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN3O95197 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN3O95197 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN3O95197 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN3O95197 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN3O95197 CICP6-201ENST00000457191 2729 ntBASIC18.1■□□□□ 0.49
RTN3O95197 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN3O95197 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN3O95197 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RTN3O95197 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms