Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NDUFS3O75489 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 KRT18P31-201ENST00000506277 1292 ntBASIC17.16■□□□□ 0.34
NDUFS3O75489 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.16■□□□□ 0.34
NDUFS3O75489 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 AC091304.2-201ENST00000564639 760 ntBASIC17.16■□□□□ 0.34
NDUFS3O75489 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.16■□□□□ 0.34
NDUFS3O75489 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.16■□□□□ 0.34
NDUFS3O75489 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.16■□□□□ 0.34
NDUFS3O75489 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFS3O75489 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFS3O75489 AC092053.1-201ENST00000605787 1936 ntBASIC17.15■□□□□ 0.34
NDUFS3O75489 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NDUFS3O75489 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NDUFS3O75489 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 AC097637.2-201ENST00000624096 1997 ntBASIC17.15■□□□□ 0.34
NDUFS3O75489 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFS3O75489 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.15■□□□□ 0.34
NDUFS3O75489 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFS3O75489 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFS3O75489 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFS3O75489 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFS3O75489 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.15■□□□□ 0.34
NDUFS3O75489 LINC01711-201ENST00000598340 967 ntBASIC17.15■□□□□ 0.34
NDUFS3O75489 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 AC073592.4-201ENST00000623827 446 ntBASIC17.15■□□□□ 0.34
NDUFS3O75489 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFS3O75489 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFS3O75489 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NDUFS3O75489 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFS3O75489 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFS3O75489 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NDUFS3O75489 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.34
NDUFS3O75489 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
NDUFS3O75489 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFS3O75489 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 RBM17P3-201ENST00000417687 1192 ntBASIC17.14■□□□□ 0.33
NDUFS3O75489 TSPY19P-201ENST00000418461 509 ntBASIC17.14■□□□□ 0.33
NDUFS3O75489 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.14■□□□□ 0.33
NDUFS3O75489 TSPY18P-201ENST00000441642 509 ntBASIC17.14■□□□□ 0.33
NDUFS3O75489 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFS3O75489 AC106795.1-205ENST00000512851 1056 ntBASIC17.14■□□□□ 0.33
NDUFS3O75489 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.14■□□□□ 0.33
NDUFS3O75489 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.14■□□□□ 0.33
NDUFS3O75489 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFS3O75489 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NDUFS3O75489 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
NDUFS3O75489 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS3O75489 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFS3O75489 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 GPR89P-201ENST00000407924 1495 ntBASIC17.13■□□□□ 0.33
NDUFS3O75489 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS3O75489 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS3O75489 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS3O75489 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NDUFS3O75489 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFS3O75489 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms