Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.98■□□□□ 0.79
CTNND1O60716 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CTNND1O60716 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CTNND1O60716 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.98■□□□□ 0.79
CTNND1O60716 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.98■□□□□ 0.79
CTNND1O60716 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CTNND1O60716 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 DUX4L17-201ENST00000557360 1267 ntBASIC19.98■□□□□ 0.79
CTNND1O60716 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.98■□□□□ 0.79
CTNND1O60716 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.98■□□□□ 0.79
CTNND1O60716 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.97■□□□□ 0.79
CTNND1O60716 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.97■□□□□ 0.79
CTNND1O60716 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.97■□□□□ 0.79
CTNND1O60716 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.97■□□□□ 0.79
CTNND1O60716 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.97■□□□□ 0.79
CTNND1O60716 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.97■□□□□ 0.79
CTNND1O60716 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.97■□□□□ 0.79
CTNND1O60716 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTNND1O60716 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.97■□□□□ 0.79
CTNND1O60716 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.97■□□□□ 0.79
CTNND1O60716 FAM58DP-201ENST00000428076 619 ntBASIC19.97■□□□□ 0.79
CTNND1O60716 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.97■□□□□ 0.79
CTNND1O60716 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.97■□□□□ 0.79
CTNND1O60716 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.97■□□□□ 0.79
CTNND1O60716 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.97■□□□□ 0.79
CTNND1O60716 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
CTNND1O60716 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.97■□□□□ 0.79
CTNND1O60716 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.97■□□□□ 0.79
CTNND1O60716 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
CTNND1O60716 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTNND1O60716 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 AC012569.1-201ENST00000591191 1524 ntBASIC19.97■□□□□ 0.79
CTNND1O60716 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTNND1O60716 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CTNND1O60716 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.96■□□□□ 0.79
CTNND1O60716 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTNND1O60716 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CTNND1O60716 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTNND1O60716 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTNND1O60716 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTNND1O60716 KRT18P32-201ENST00000424695 1287 ntBASIC19.96■□□□□ 0.79
CTNND1O60716 SLC25A6P5-201ENST00000435663 894 ntBASIC19.96■□□□□ 0.79
CTNND1O60716 CNN2P2-201ENST00000443536 909 ntBASIC19.96■□□□□ 0.79
CTNND1O60716 CNN2P3-201ENST00000450201 906 ntBASIC19.96■□□□□ 0.79
CTNND1O60716 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.96■□□□□ 0.79
CTNND1O60716 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.96■□□□□ 0.79
CTNND1O60716 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.96■□□□□ 0.79
CTNND1O60716 DUX4L27-201ENST00000554796 1261 ntBASIC19.96■□□□□ 0.79
CTNND1O60716 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.96■□□□□ 0.79
CTNND1O60716 AL390955.2-201ENST00000603032 514 ntBASIC19.96■□□□□ 0.79
CTNND1O60716 AL009183.1-201ENST00000603760 355 ntBASIC19.96■□□□□ 0.79
CTNND1O60716 AL136317.3-201ENST00000618497 906 ntBASIC19.96■□□□□ 0.79
CTNND1O60716 AP001059.3-201ENST00000619053 235 ntBASIC19.96■□□□□ 0.79
CTNND1O60716 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.96■□□□□ 0.79
CTNND1O60716 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTNND1O60716 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTNND1O60716 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CTNND1O60716 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CTNND1O60716 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTNND1O60716 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.96■□□□□ 0.79
CTNND1O60716 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CTNND1O60716 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTNND1O60716 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CTNND1O60716 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CTNND1O60716 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.95■□□□□ 0.78
CTNND1O60716 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CTNND1O60716 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.95■□□□□ 0.78
CTNND1O60716 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.95■□□□□ 0.78
CTNND1O60716 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.95■□□□□ 0.78
CTNND1O60716 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.95■□□□□ 0.78
CTNND1O60716 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.95■□□□□ 0.78
CTNND1O60716 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
CTNND1O60716 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms