Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH7O60245 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH7O60245 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.44■□□□□ 0.22
PCDH7O60245 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH7O60245 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
PCDH7O60245 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
PCDH7O60245 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH7O60245 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDH7O60245 ABCD1P5-201ENST00000445663 754 ntBASIC16.44■□□□□ 0.22
PCDH7O60245 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH7O60245 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PCDH7O60245 AL591684.3-201ENST00000605187 298 ntBASIC16.44■□□□□ 0.22
PCDH7O60245 AC092068.3-201ENST00000587894 2016 ntBASIC16.44■□□□□ 0.22
PCDH7O60245 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH7O60245 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PCDH7O60245 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH7O60245 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH7O60245 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDH7O60245 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDH7O60245 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDH7O60245 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDH7O60245 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH7O60245 UPK3BP1-201ENST00000428678 509 ntBASIC16.43■□□□□ 0.22
PCDH7O60245 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDH7O60245 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.43■□□□□ 0.22
PCDH7O60245 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDH7O60245 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDH7O60245 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDH7O60245 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDH7O60245 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PCDH7O60245 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH7O60245 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 GPR89P-201ENST00000407924 1495 ntBASIC16.42■□□□□ 0.22
PCDH7O60245 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
PCDH7O60245 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDH7O60245 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH7O60245 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDH7O60245 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PCDH7O60245 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDH7O60245 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH7O60245 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDH7O60245 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDH7O60245 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH7O60245 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH7O60245 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH7O60245 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH7O60245 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH7O60245 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH7O60245 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH7O60245 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH7O60245 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PCDH7O60245 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms