Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RIPK2O43353 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.49■□□□□ 0.39
RIPK2O43353 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.49■□□□□ 0.39
RIPK2O43353 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.49■□□□□ 0.39
RIPK2O43353 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.49■□□□□ 0.39
RIPK2O43353 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.49■□□□□ 0.39
RIPK2O43353 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.49■□□□□ 0.39
RIPK2O43353 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.49■□□□□ 0.39
RIPK2O43353 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.49■□□□□ 0.39
RIPK2O43353 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.49■□□□□ 0.39
RIPK2O43353 AC140113.3-201ENST00000605663 199 ntBASIC17.49■□□□□ 0.39
RIPK2O43353 LINC01568-207ENST00000641790 1380 ntBASIC17.49■□□□□ 0.39
RIPK2O43353 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RIPK2O43353 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RIPK2O43353 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RIPK2O43353 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RIPK2O43353 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.48■□□□□ 0.39
RIPK2O43353 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.48■□□□□ 0.39
RIPK2O43353 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.48■□□□□ 0.39
RIPK2O43353 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.48■□□□□ 0.39
RIPK2O43353 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RIPK2O43353 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.48■□□□□ 0.39
RIPK2O43353 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.48■□□□□ 0.39
RIPK2O43353 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.48■□□□□ 0.39
RIPK2O43353 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.48■□□□□ 0.39
RIPK2O43353 STK25P1-201ENST00000585406 838 ntBASIC17.48■□□□□ 0.39
RIPK2O43353 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.48■□□□□ 0.39
RIPK2O43353 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.48■□□□□ 0.39
RIPK2O43353 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RIPK2O43353 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 GPR89P-201ENST00000407924 1495 ntBASIC17.48■□□□□ 0.39
RIPK2O43353 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.48■□□□□ 0.39
RIPK2O43353 AL135999.2-201ENST00000622438 1686 ntBASIC17.48■□□□□ 0.39
RIPK2O43353 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.48■□□□□ 0.39
RIPK2O43353 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RIPK2O43353 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RIPK2O43353 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RIPK2O43353 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.47■□□□□ 0.39
RIPK2O43353 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.47■□□□□ 0.39
RIPK2O43353 PAUPAR-201ENST00000630360 2965 ntBASIC17.47■□□□□ 0.39
RIPK2O43353 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RIPK2O43353 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 STARP1-201ENST00000397973 869 ntBASIC17.47■□□□□ 0.39
RIPK2O43353 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.47■□□□□ 0.39
RIPK2O43353 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.47■□□□□ 0.39
RIPK2O43353 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 AL365203.3-201ENST00000609742 2057 ntBASIC17.47■□□□□ 0.39
RIPK2O43353 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RIPK2O43353 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.47■□□□□ 0.39
RIPK2O43353 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIPK2O43353 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RIPK2O43353 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RIPK2O43353 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms