Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.39■□□□□ 0.37
AP3B1O00203 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.39■□□□□ 0.37
AP3B1O00203 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.39■□□□□ 0.37
AP3B1O00203 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.39■□□□□ 0.37
AP3B1O00203 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP3B1O00203 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.39■□□□□ 0.37
AP3B1O00203 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.39■□□□□ 0.37
AP3B1O00203 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 AC106886.4-201ENST00000623557 2502 ntBASIC17.39■□□□□ 0.37
AP3B1O00203 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3B1O00203 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AP3B1O00203 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.38■□□□□ 0.37
AP3B1O00203 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3B1O00203 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3B1O00203 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3B1O00203 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.38■□□□□ 0.37
AP3B1O00203 PRYP5-201ENST00000451909 266 ntBASIC17.38■□□□□ 0.37
AP3B1O00203 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.38■□□□□ 0.37
AP3B1O00203 AL591684.3-201ENST00000605187 298 ntBASIC17.38■□□□□ 0.37
AP3B1O00203 AC010331.1-201ENST00000611423 582 ntBASIC17.38■□□□□ 0.37
AP3B1O00203 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3B1O00203 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 AC079776.2-201ENST00000641154 1609 ntBASIC17.38■□□□□ 0.37
AP3B1O00203 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3B1O00203 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP3B1O00203 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3B1O00203 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3B1O00203 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP3B1O00203 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3B1O00203 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.37■□□□□ 0.37
AP3B1O00203 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 KRT18P35-201ENST00000510488 1269 ntBASIC17.37■□□□□ 0.37
AP3B1O00203 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3B1O00203 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.37■□□□□ 0.37
AP3B1O00203 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.37■□□□□ 0.37
AP3B1O00203 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP3B1O00203 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3B1O00203 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
AP3B1O00203 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.37■□□□□ 0.37
AP3B1O00203 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP3B1O00203 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3B1O00203 AC005915.1-201ENST00000624912 2018 ntBASIC17.37■□□□□ 0.37
AP3B1O00203 FER1L4-210ENST00000615531 5998 ntBASIC17.36■□□□□ 0.37
AP3B1O00203 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
AP3B1O00203 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3B1O00203 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP3B1O00203 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP3B1O00203 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
AP3B1O00203 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3B1O00203 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.36■□□□□ 0.37
AP3B1O00203 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3B1O00203 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3B1O00203 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3B1O00203 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
AP3B1O00203 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms