Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AC080080.1-201ENST00000625121 2420 ntBASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AL020989.1-201ENST00000422979 469 ntBASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 MIR1199-201ENST00000621445 119 ntBASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AL022326.1-202ENST00000641533 845 ntBASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AC107918.4-202ENST00000641623 219 ntBASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 LYSMD4-203ENST00000378904 2122 ntBASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB11Q9Y5F2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 AC009336.1-201ENST00000608941 1553 ntBASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 SPDYE21P-201ENST00000413323 827 ntBASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 RPS8P6-201ENST00000426177 609 ntBASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 GPX1P2-201ENST00000429271 606 ntBASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 AC079776.2-201ENST00000641154 1609 ntBASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB11Q9Y5F2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms