Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 AC138028.4-201ENST00000564984 1845 ntBASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 COX5BP8-201ENST00000416911 349 ntBASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 TSSK5P-201ENST00000423978 907 ntBASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 MIR3909-201ENST00000579518 119 ntBASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCBQ9Y3I0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 AC016027.1-202ENST00000607927 1699 ntBASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 AC004233.3-201ENST00000607794 1269 ntBASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCBQ9Y3I0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCBQ9Y3I0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 LINC00304-203ENST00000565008 1864 ntBASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 AC022144.1-201ENST00000602255 1580 ntBASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms