Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 LINC01225-203ENST00000563550 1244 ntBASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 AC091167.2-201ENST00000579581 588 ntBASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LEMD3Q9Y2U8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 SLC25A1P3-201ENST00000395415 828 ntBASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 KRT18P32-201ENST00000424695 1287 ntBASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 AC005498.2-205ENST00000593218 784 ntBASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 AP001059.3-201ENST00000619053 235 ntBASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 Z92544.3-201ENST00000624747 417 ntBASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LEMD3Q9Y2U8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 GPS2P2-201ENST00000430745 888 ntBASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 KRT8P23-201ENST00000560090 1207 ntBASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 AC084121.4-201ENST00000641598 221 ntBASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 AF228730.8-201ENST00000642140 221 ntBASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.72■□□□□ 0.91
LEMD3Q9Y2U8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.71■□□□□ 0.91
LEMD3Q9Y2U8 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms