Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH1Q9Y2L9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 C1QL1P1-201ENST00000568105 661 ntBASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 Z99916.2-201ENST00000604037 246 ntBASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCH1Q9Y2L9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 AC009949.1-201ENST00000623048 1830 ntBASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH1Q9Y2L9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.39■□□□□ 0.22
LRCH1Q9Y2L9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.39■□□□□ 0.22
LRCH1Q9Y2L9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.39■□□□□ 0.22
LRCH1Q9Y2L9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LRCH1Q9Y2L9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms