Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 KRT18P3-201ENST00000451602 1288 ntBASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 AL139288.1-201ENST00000623748 933 ntBASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 LINC00304-203ENST00000565008 1864 ntBASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
FNDC3AQ9Y2H6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 RPSAP43-201ENST00000402237 625 ntBASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 GPX1P2-201ENST00000429271 606 ntBASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 AC097374.2-201ENST00000618617 1306 ntBASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FNDC3AQ9Y2H6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 PP12613-201ENST00000424958 2230 ntBASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 COX5BP2-201ENST00000392354 334 ntBASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 AC109462.3-201ENST00000573934 613 ntBASIC17.6■□□□□ 0.41
FNDC3AQ9Y2H6 NKAPP1-205ENST00000585790 367 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms