Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 AC016734.2-201ENST00000624325 1377 ntBASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALCOCO1Q9P1Z2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.87■□□□□ 0.61
CALCOCO1Q9P1Z2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 GPR32P1-201ENST00000601788 811 ntBASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALCOCO1Q9P1Z2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CALCOCO1Q9P1Z2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms