Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 AC018845.2-201ENST00000568326 409 ntBASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 GPALPP1-207ENST00000611650 899 ntBASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 YBX2P1-201ENST00000394192 760 ntBASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 AC092865.6-201ENST00000642101 219 ntBASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20BQ9P0W2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20BQ9P0W2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.89■□□□□ 0.94
HMG20BQ9P0W2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20BQ9P0W2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20BQ9P0W2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20BQ9P0W2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20BQ9P0W2 AC138932.1-201ENST00000534164 6830 ntBASIC20.89■□□□□ 0.94
HMG20BQ9P0W2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20BQ9P0W2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 AC139530.3-201ENST00000620344 690 ntBASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.89■□□□□ 0.93
HMG20BQ9P0W2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 SLC25A1P3-201ENST00000395415 828 ntBASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 AC004832.2-201ENST00000426397 482 ntBASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HMG20BQ9P0W2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms