Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 SEC1P-202ENST00000473944 940 ntBASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 PRELID1P1-202ENST00000567272 903 ntBASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.43■□□□□ 0.22
CCM2LQ9NUG4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 AP000523.1-201ENST00000398242 1049 ntBASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 AC092119.3-201ENST00000612618 583 ntBASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.42■□□□□ 0.22
CCM2LQ9NUG4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 AL845331.1-201ENST00000424978 1190 ntBASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 AP000347.1-202ENST00000435868 847 ntBASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 FDX1P1-201ENST00000449115 551 ntBASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 MIR3652-201ENST00000579335 131 ntBASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCM2LQ9NUG4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms