Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC066615.1-201ENST00000640911 628 ntBASIC17.36■□□□□ 0.37
VPS11Q9H270 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS11Q9H270 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
VPS11Q9H270 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS11Q9H270 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VPS11Q9H270 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VPS11Q9H270 AC079328.2-201ENST00000561241 3354 ntBASIC17.36■□□□□ 0.37
VPS11Q9H270 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VPS11Q9H270 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VPS11Q9H270 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 AL391005.1-201ENST00000623953 2435 ntBASIC17.35■□□□□ 0.37
VPS11Q9H270 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
VPS11Q9H270 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
VPS11Q9H270 AC005521.1-201ENST00000393351 872 ntBASIC17.35■□□□□ 0.37
VPS11Q9H270 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS11Q9H270 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.35■□□□□ 0.37
VPS11Q9H270 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.35■□□□□ 0.37
VPS11Q9H270 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.35■□□□□ 0.37
VPS11Q9H270 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.35■□□□□ 0.37
VPS11Q9H270 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 AC097374.2-201ENST00000618617 1306 ntBASIC17.35■□□□□ 0.37
VPS11Q9H270 PCDHA1-201ENST00000378133 2726 ntBASIC17.35■□□□□ 0.37
VPS11Q9H270 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS11Q9H270 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS11Q9H270 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.35■□□□□ 0.37
VPS11Q9H270 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS11Q9H270 CYP2T1P-202ENST00000641596 2535 ntBASIC17.35■□□□□ 0.37
VPS11Q9H270 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VPS11Q9H270 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VPS11Q9H270 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS11Q9H270 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS11Q9H270 RNF152P1-201ENST00000397754 604 ntBASIC17.34■□□□□ 0.37
VPS11Q9H270 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 KRT18P57-201ENST00000443599 1254 ntBASIC17.34■□□□□ 0.37
VPS11Q9H270 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS11Q9H270 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VPS11Q9H270 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS11Q9H270 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS11Q9H270 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 IGHV3-52-201ENST00000519770 353 ntBASIC17.34■□□□□ 0.37
VPS11Q9H270 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS11Q9H270 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS11Q9H270 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.34■□□□□ 0.37
VPS11Q9H270 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 AC109462.3-201ENST00000573934 613 ntBASIC17.34■□□□□ 0.37
VPS11Q9H270 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.34■□□□□ 0.37
VPS11Q9H270 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS11Q9H270 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.34■□□□□ 0.37
VPS11Q9H270 AC073508.3-201ENST00000619697 1419 ntBASIC17.34■□□□□ 0.37
VPS11Q9H270 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS11Q9H270 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS11Q9H270 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS11Q9H270 LINC02199-201ENST00000506655 2702 ntBASIC17.34■□□□□ 0.37
VPS11Q9H270 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
VPS11Q9H270 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.33■□□□□ 0.37
VPS11Q9H270 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS11Q9H270 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VPS11Q9H270 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms