Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 AL139400.1-201ENST00000366220 510 ntBASIC17.9■□□□□ 0.46
LRRC3Q9BY71 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 ADH5P3-201ENST00000433842 1137 ntBASIC17.9■□□□□ 0.46
LRRC3Q9BY71 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 AL121761.2-201ENST00000598007 1648 ntBASIC17.9■□□□□ 0.46
LRRC3Q9BY71 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC3Q9BY71 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
LRRC3Q9BY71 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.89■□□□□ 0.46
LRRC3Q9BY71 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 AL355312.1-201ENST00000407115 2176 ntBASIC17.89■□□□□ 0.45
LRRC3Q9BY71 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 AC004461.1-201ENST00000412461 403 ntBASIC17.89■□□□□ 0.45
LRRC3Q9BY71 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 CYMP-203ENST00000474680 1263 ntBASIC17.89■□□□□ 0.45
LRRC3Q9BY71 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 REXO1L3P-201ENST00000622202 1288 ntBASIC17.89■□□□□ 0.45
LRRC3Q9BY71 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 AC020916.1-201ENST00000587762 1774 ntBASIC17.89■□□□□ 0.45
LRRC3Q9BY71 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LRRC3Q9BY71 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 AC067852.2-201ENST00000590513 2313 ntBASIC17.88■□□□□ 0.45
LRRC3Q9BY71 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
LRRC3Q9BY71 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 AC133963.1-201ENST00000504166 1679 ntBASIC17.87■□□□□ 0.45
LRRC3Q9BY71 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 AL645939.2-201ENST00000427340 991 ntBASIC17.87■□□□□ 0.45
LRRC3Q9BY71 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms