Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 LINC01451-201ENST00000623792 534 ntBASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 AL121956.5-201ENST00000625261 221 ntBASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRDL1Q9BU40 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 CICP6-201ENST00000457191 2729 ntBASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 AC124864.1-201ENST00000623408 392 ntBASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 BX276092.7-203ENST00000637198 1536 ntBASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRDL1Q9BU40 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 AC005332.1-201ENST00000577698 1310 ntBASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms