Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BBS4Q96RK4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
BBS4Q96RK4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 HCG4P8-203ENST00000443049 980 ntBASIC16.35■□□□□ 0.21
BBS4Q96RK4 KRT16P4-201ENST00000453883 522 ntBASIC16.35■□□□□ 0.21
BBS4Q96RK4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.35■□□□□ 0.21
BBS4Q96RK4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS4Q96RK4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
BBS4Q96RK4 PMPCAP1-201ENST00000508114 1576 ntBASIC16.34■□□□□ 0.21
BBS4Q96RK4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 AL135999.2-201ENST00000622438 1686 ntBASIC16.34■□□□□ 0.21
BBS4Q96RK4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 MIR3652-201ENST00000579335 131 ntBASIC16.34■□□□□ 0.21
BBS4Q96RK4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS4Q96RK4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS4Q96RK4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
BBS4Q96RK4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BBS4Q96RK4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.33■□□□□ 0.21
BBS4Q96RK4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.33■□□□□ 0.21
BBS4Q96RK4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.33■□□□□ 0.21
BBS4Q96RK4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BBS4Q96RK4 AD000864.1-201ENST00000624076 2295 ntBASIC16.33■□□□□ 0.2
BBS4Q96RK4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.33■□□□□ 0.2
BBS4Q96RK4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms