Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 AL603756.1-201ENST00000606511 2163 ntBASIC17.76■□□□□ 0.43
C9orf72Q96LT7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 AC096633.1-201ENST00000422446 749 ntBASIC17.76■□□□□ 0.43
C9orf72Q96LT7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 AC092329.2-201ENST00000598402 547 ntBASIC17.76■□□□□ 0.43
C9orf72Q96LT7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
C9orf72Q96LT7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AC078925.2-201ENST00000624013 1973 ntBASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AC010460.3-201ENST00000511359 1579 ntBASIC17.75■□□□□ 0.43
C9orf72Q96LT7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 TSPY22P-201ENST00000427496 604 ntBASIC17.75■□□□□ 0.43
C9orf72Q96LT7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AC002558.1-201ENST00000488906 803 ntBASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AP003733.1-201ENST00000491725 852 ntBASIC17.75■□□□□ 0.43
C9orf72Q96LT7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 RNF126P1-202ENST00000569893 925 ntBASIC17.75■□□□□ 0.43
C9orf72Q96LT7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AC092068.3-201ENST00000587894 2016 ntBASIC17.75■□□□□ 0.43
C9orf72Q96LT7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
C9orf72Q96LT7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 CICP6-201ENST00000457191 2729 ntBASIC17.74■□□□□ 0.43
C9orf72Q96LT7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.74■□□□□ 0.43
C9orf72Q96LT7 CHCHD2P8-201ENST00000429873 447 ntBASIC17.74■□□□□ 0.43
C9orf72Q96LT7 AP002383.4-201ENST00000442518 975 ntBASIC17.74■□□□□ 0.43
C9orf72Q96LT7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms