Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 PCDHB18P-201ENST00000524813 2368 ntBASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 AL023806.1-201ENST00000603994 1649 ntBASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 IGLL3P-201ENST00000412472 434 ntBASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 SLC25A6P2-201ENST00000497974 877 ntBASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 PGAM5P1-201ENST00000518923 814 ntBASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMARCD1Q96GM5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 AC040169.1-201ENST00000565382 521 ntBASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 AC002310.6-201ENST00000624451 1377 ntBASIC18.04■□□□□ 0.48
SMARCD1Q96GM5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 LINC02012-201ENST00000608206 1725 ntBASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 KRT18P2-201ENST00000447938 1258 ntBASIC18.03■□□□□ 0.48
SMARCD1Q96GM5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms