Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 AC112497.1-201ENST00000624824 639 ntBASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 AC092384.3-202ENST00000564646 2873 ntBASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP6Q96FZ7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 AC124947.2-201ENST00000547118 1133 ntBASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP6Q96FZ7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms