Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 KRT18P3-201ENST00000451602 1288 ntBASIC20.21■□□□□ 0.83
STAG1Q8WVM7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 GPALPP1-207ENST00000611650 899 ntBASIC20.21■□□□□ 0.83
STAG1Q8WVM7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 AC010654.1-201ENST00000615722 808 ntBASIC20.21■□□□□ 0.83
STAG1Q8WVM7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 AC002310.6-201ENST00000624451 1377 ntBASIC20.21■□□□□ 0.83
STAG1Q8WVM7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
STAG1Q8WVM7 AP001094.4-201ENST00000579008 2176 ntBASIC20.19■□□□□ 0.82
STAG1Q8WVM7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 MIR4751-201ENST00000578027 74 ntBASIC20.19■□□□□ 0.82
STAG1Q8WVM7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
STAG1Q8WVM7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 KRT18P13-201ENST00000400056 1290 ntBASIC20.18■□□□□ 0.82
STAG1Q8WVM7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 VN2R19P-201ENST00000442399 1052 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms