Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 KRT18P28-201ENST00000453838 1332 ntBASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 SNHG9-202ENST00000564014 471 ntBASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 AC084018.2-201ENST00000613093 2607 ntBASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 ELL2P1-201ENST00000413990 1906 ntBASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 AL135999.2-201ENST00000622438 1686 ntBASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 AC046185.3-201ENST00000623228 1824 ntBASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.05■□□□□ 0.48
SHKBP1Q8TBC3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 AC254562.1-201ENST00000417586 456 ntBASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 AC025580.3-201ENST00000617932 1424 ntBASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SHKBP1Q8TBC3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 AC124067.4-201ENST00000519691 2379 ntBASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 METTL21AP1-201ENST00000438852 635 ntBASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 CEND1P1-201ENST00000451006 455 ntBASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms