Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 STK25P1-201ENST00000585406 838 ntBASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AC016734.2-201ENST00000624325 1377 ntBASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 CHCHD2P8-201ENST00000429873 447 ntBASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AC103564.2-201ENST00000432853 1299 ntBASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AL049597.2-201ENST00000565575 961 ntBASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AL121672.3-201ENST00000608644 468 ntBASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AL121956.5-201ENST00000625261 221 ntBASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 AC092171.3-201ENST00000610122 2651 ntBASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLHC1Q8NHS4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLHC1Q8NHS4 PCDHB19P-201ENST00000570871 2371 ntBASIC16.53■□□□□ 0.24
CLHC1Q8NHS4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLHC1Q8NHS4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.53■□□□□ 0.24
CLHC1Q8NHS4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLHC1Q8NHS4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLHC1Q8NHS4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms