Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SPTSSBQ8NFR3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 AC005252.3-201ENST00000623855 2258 ntBASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 AC092384.3-202ENST00000564646 2873 ntBASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 KRT16P3-201ENST00000439127 1283 ntBASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 AC010141.2-201ENST00000452426 721 ntBASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 OR2I1P-208ENST00000641137 4948 ntBASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SPTSSBQ8NFR3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms