Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 MRPL3P1-201ENST00000400109 1033 ntBASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 LAGE3P1-201ENST00000425356 484 ntBASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 HNRNPDP1-201ENST00000439535 754 ntBASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 AC009078.2-202ENST00000463353 338 ntBASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 AL353135.1-201ENST00000606729 504 ntBASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 AC107918.4-202ENST00000641623 219 ntBASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT1Q8NF37 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 AL139424.1-201ENST00000607572 797 ntBASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 AL773604.1-201ENST00000617417 272 ntBASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.37■□□□□ 0.37
LPCAT1Q8NF37 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 EGFEM1P-202ENST00000431685 1563 ntBASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT1Q8NF37 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT1Q8NF37 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms