Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL9Q8NET4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 AL353732.1-201ENST00000569618 1459 ntBASIC21.06■□□□□ 0.96
RTL9Q8NET4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL9Q8NET4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTL9Q8NET4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 HLA-J-203ENST00000494367 1087 ntBASIC21.05■□□□□ 0.96
RTL9Q8NET4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 FAM86C2P-203ENST00000528684 1004 ntBASIC21.05■□□□□ 0.96
RTL9Q8NET4 AC109635.5-201ENST00000533593 962 ntBASIC21.05■□□□□ 0.96
RTL9Q8NET4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 AC091167.2-201ENST00000579581 588 ntBASIC21.05■□□□□ 0.96
RTL9Q8NET4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 AC026120.1-201ENST00000611536 926 ntBASIC21.05■□□□□ 0.96
RTL9Q8NET4 AC009093.7-201ENST00000623853 1223 ntBASIC21.05■□□□□ 0.96
RTL9Q8NET4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL9Q8NET4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL9Q8NET4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL9Q8NET4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL9Q8NET4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RTL9Q8NET4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL9Q8NET4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL9Q8NET4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 HCG4-201ENST00000418983 998 ntBASIC21.04■□□□□ 0.96
RTL9Q8NET4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 AL096865.1-201ENST00000606796 927 ntBASIC21.04■□□□□ 0.96
RTL9Q8NET4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
RTL9Q8NET4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL9Q8NET4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 TOP3BP1-201ENST00000420768 1380 ntBASIC21.03■□□□□ 0.96
RTL9Q8NET4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 AL627223.1-201ENST00000416693 442 ntBASIC21.03■□□□□ 0.96
RTL9Q8NET4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 RN7SL589P-201ENST00000481268 310 ntBASIC21.03■□□□□ 0.96
RTL9Q8NET4 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 KRT8P48-201ENST00000515599 1220 ntBASIC21.03■□□□□ 0.96
RTL9Q8NET4 MIR3909-201ENST00000579518 119 ntBASIC21.03■□□□□ 0.96
RTL9Q8NET4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 AC005498.2-205ENST00000593218 784 ntBASIC21.03■□□□□ 0.96
RTL9Q8NET4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL9Q8NET4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.03■□□□□ 0.96
RTL9Q8NET4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL9Q8NET4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTL9Q8NET4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RTL9Q8NET4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL9Q8NET4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.02■□□□□ 0.96
RTL9Q8NET4 AKAP8P1-201ENST00000434743 1349 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms