Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF548Q8NEK5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 AC108073.2-201ENST00000464002 357 ntBASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 AC112482.1-201ENST00000492080 688 ntBASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 STK19B-204ENST00000512515 211 ntBASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 MIR4751-201ENST00000578027 74 ntBASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF548Q8NEK5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 KRT18P2-201ENST00000447938 1258 ntBASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 RPS15P9-201ENST00000494093 319 ntBASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF548Q8NEK5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF548Q8NEK5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms