Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 AL691432.3-201ENST00000621860 400 ntBASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.44■□□□□ 0.22
SRFBP1Q8NEF9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 AKR1C7P-201ENST00000305623 895 ntBASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 LINC00982-205ENST00000420957 435 ntBASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 AL450487.1-201ENST00000426799 995 ntBASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 AF238378.1-201ENST00000526806 358 ntBASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.43■□□□□ 0.22
SRFBP1Q8NEF9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 GPR89P-201ENST00000407924 1495 ntBASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 AC004870.1-201ENST00000315132 882 ntBASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 FAAHP1-202ENST00000446499 1238 ntBASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 AC124947.2-201ENST00000547118 1133 ntBASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 AC139887.3-201ENST00000568585 713 ntBASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRFBP1Q8NEF9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms