Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 AL671277.1-201ENST00000429656 993 ntBASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 AC005498.2-205ENST00000593218 784 ntBASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 AL355306.1-201ENST00000415580 579 ntBASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 AC140658.5-201ENST00000438532 169 ntBASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 TIMM8BP1-201ENST00000452384 211 ntBASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 RN7SL589P-201ENST00000481268 310 ntBASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 AJ011932.1-201ENST00000621707 465 ntBASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNPOQ8N3V7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SPDYE11-202ENST00000450699 704 ntBASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 AL512356.2-201ENST00000546955 174 ntBASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SPDYE9P-201ENST00000570642 692 ntBASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 MIR4745-201ENST00000577608 62 ntBASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SPDYE10P-202ENST00000612005 668 ntBASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SPDYE8P-202ENST00000612377 668 ntBASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms